First install the dependencies: gfortran liblapack-dev Now cd to the src directory and build as follows: $ make all $ make install At this point you should have some files in Though, I am surprised that /usr/lib is used; I think most linux distributions set /etc/ld.so.conf such that /usr/local/lib comes before /usr/lib. The problem seems somehow connected to the openssl package, but I've never changed it. CentOS 5.2, Fluxbox, eLinks, Firefox 3, Mutt, SLRN, Midnight Commander, Win4LinPro 5, GnuCash, OpenOffice 2.3, the Gimp, Danpei, Nero-Linux 3.5, Bastille-Linux. 0 Back to top MultiQuote Reply #7 Crashdamage Awesome http://netlookmag.com/symbol-lookup/symbol-lookup-error-undefined-symbol-linux.html
Update: Did some more research and posted a little more diagnostic info. Back to top Ana VasileJoined: 26 Mar 2006Posts: 25Affiliation: Institute for Space Sciences Posted: May 04 2006 Thank you very much David for your help, it worked!!! An early-on careful inspection of this would've quickly let me to my problem!)ldd -d -r TestCppProgram (Shows you any undefined symbols. mpiifort mycode.f90 -r8 -O2 -xHost -override-limits -o output.out [[email protected] ORIGINALV]$ mpirun -n 1 ./output.out [gauss:31148] mca: base: component_find: unable to open /usr/local/openmpi/1.10.0/lib/openmpi/mca_plm_tm: libtorque.so.2: cannot open shared object file: No such file
Just downgrade to the last available OpenSSL RPM for 10.1 (not sure of the name, it'd either be libopenssl or just openssl) Whether or not you think you've changed an openssl How should I tell my employer? Are there too few Supernova Remnants to support the Milky Way being billions of years old? At least nothing else seems to have broken fooling around.
Somebody please correct me if I'm wrong)nm TestCppProgram | c++filt (displays unmangled symbol information)nm TestCppProgram (Displays mangled symbol information. Usually I never comment on blogs but your article is so convincing that I never stop myself to say something about it. Move the gfortran include option to before the f90 file name, as in: gfortran -I /usr/local/netcdf_412_gfortran/include read_smart.f90 -L /usr/local/netcdf_412_gfortran/lib -lnetcdff -lnetcdf so the compiler knows where to look for the netcdf.mod I'm borked now, but I may still find a way out.
Something else is causing this illness and apparently a none of the doctors have a correct diagnosis. How can I solve this? 13.04 64-bit share|improve this question edited May 8 '13 at 13:00 Basharat Sialvi 16.2k83970 asked May 8 '13 at 12:27 Fotis 106115 Areyou sure Your Answer draft saved draft discarded Sign up or log in Sign up using Google Sign up using Facebook Sign up using Email and Password Post as a guest Name Everything linked and compiled fine.
more stack exchange communities company blog Stack Exchange Inbox Reputation and Badges sign up log in tour help Tour Start here for a quick overview of the site Help Center Detailed asked 9 months ago viewed 660 times Related 0MPI_REDUCE error1MPI_ALLGATHER error parallelizing code0Error when making a fortran MPI_Allgather code2Error in building MPI program1Error using MPI_WTIME with MPI_TESTANY in Fortran-2Fortran with MPI Grass grows through the floor of my building Why does MIT have a /8 IPv4 block? Check your PATH and make sure that the path to Intel MPI (used to compile the executable) comes before the path to Open MPI.
This isn't a gfortran problem. Anything might help. Unable to complete a task at work. You're doing a great job Man,Keep it up.
Thus when running "gfortran" (which happens when building the libgfortran library), the wrong shared library is picked up. http://netlookmag.com/symbol-lookup/symbol-lookup-error-undefined-symbol-c.html It is a user's system configuration problem. If you do not want to have your interactions made available in this way, you must let us know in each email you send to us. Most stuff works as good as ever and I'm not worried about losing anything.
Invocation command line was $ /usr/local/GCC/GCC-4.4.2/gcc-4.4.2/libgfortran/configure --cache-file=./config.cache --enable-multilib --prefix=/usr/local/GCC/gcc-4.4.2 --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-libgcj-multifile --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-188.8.131.52/jre --with-gmp=/usr/local --with-mpfr=/usr/local --enable-languages=c,ada,c++,fortran,java,objc,obj-c++ --program-transform-name=s,y,y, --with-target-subdir=i686-pc-linux-gnu --build=i686-pc-linux-gnu --host=i686-pc-linux-gnu --target=i686-pc-linux-gnu --srcdir=/usr/local/GCC/GCC-4.4.2/gcc-4.4.2/libgfortran ## No good, same symbol error. Tim P. http://netlookmag.com/symbol-lookup/awk-symbol-lookup-error-awk-undefined-symbol-mpfr-z-sub.html But no prize.
It was created by GNU Fortran Runtime Library configure 0.3, which was generated by GNU Autoconf 2.59. Join them; it only takes a minute: Sign up MPIRUN - symbol lookup error - undefined symbol up vote 1 down vote favorite I have Fortran code that is compiled using Just to make sure, check that there is a netcdf.mod file in that > > directory > > and that its last modification date corresponds to when you ran "make >
I've got hints from people that have steered me in a general area but no cure. Data (SuomiNet) Textual Weather Bulletins Data Resources Data Usage Guide LDM Feedtypes IDD Operational Status Archived Data Access Data Management Resource Center Software Display & Analysis AWIPS II GEMPAK IDV McIDAS Then I ran the program again and it raised that error: ./smartpca: symbol lookup error: ./smartpca: undefined symbol: _gfortran_internal_malloc64 From what I read, I understand that on Fedora you have to RSS Top 2 posts / 0 new Last post For more complete information about compiler optimizations, see our Optimization Notice.
It's the only common denominator between the affected packages. Worked great too keep the latest versions of stuff like OpenOffice, Firefox, etc installed for years. great post, you saved the day for me today! 11/17/2009 8:00 AM Ben said... Check This Out Cooker RPM's?
If it is a large system and you are just a user, how did you set-up your environment? –Vladimir F Feb 13 at 22:50 1 A typical MPI implementation mix-up What are the ground and flight requirements for high performance endorsement? I would greatly appreciate any help! I never had any problems this serious before because I was just careful with rpm and urpmi.
You can also use the "nc-config" command to see what Fortran flags are needed on your systems, as in nc-config --fflags and nc-config --flibs where nc-config is a command installed in Messages boards are always full of borked installations from updates. asked 3 years ago viewed 1347 times active 3 years ago Related 6“skype: symbol lookup error: skype: undefined symbol”5QtCreator wont start anymore. Not a member?
Upon running the executable, I got the following error:./TestCppProgram: symbol lookup error: ./TestCppProgram: undefined symbol: _ZN12CppProgramC1EvI searched the internet. Delaunay 2009-10-20 05:59:37 UTC I configure gcc-4.4.2 with : configure:11038: /usr/local/GCC/GCC-4.4.2/i686-gcc-4.4.2/./gcc/gfortran -B/usr/local/GCC/GCC-4.4.2/i686-gcc-4.4.2/./gcc/ -B/usr/local/GCC/gcc-4.4.2/i686-pc-linux-gnu/bin/ -B/usr/local/GCC/gcc-4.4.2/i686-pc-linux-gnu/lib/ -isystem /usr/local/GCC/gcc-4.4.2/i686-pc-linux-gnu/include -isystem /usr/local/GCC/gcc-4.4.2/i686-pc-linux-gnu/sys-include -v &5 Driving: /usr/local/GCC/GCC-4.4.2/i686-gcc-4.4.2/./gcc/gfortran -B/usr/local/GCC/GCC-4.4.2/i686-gcc-4.4.2/./gcc/ -B/usr/local/GCC/gcc-4.4.2/i686-pc-linux-gnu/bin/ -B/usr/local/GCC/gcc-4.4.2/i686-pc-linux-gnu/lib/ -isystem /usr/local/GCC/gcc-4.4.2/i686-pc-linux-gnu/include -isystem /usr/local/GCC/gcc-4.4.2/i686-pc-linux-gnu/sys-include -v Bounce off the atmosphere at reentry? What are the advantages of doing accounting on your personal finances?
Is there a performance difference in the 2 temp table initializations? I --force installed 10.1 versions for all those packages and made sure none of the newer package files got left behind. Deep theorem with trivial proof Need a way for Earth not to detect an extrasolar civilization that has radio Does using documentation as a developer make me look unprofessional? Note that the installation does not require admin privileges and does not put files anywhere outside of the eigensoft directory tree.